Comparison with linear models | Comparison with generalized linear models | Comparison with dynamic linear models | Comparison with vector autoregressive models | Multi-causal ecosystem synthesis | Site-replicated trophic cascade | Works cited

Dynamic structural equation models | Viewpoint 1: Software interface | Viewpoint 2: Mathematical details | Measurement errors | Initial conditions and total effects | Constant conditional vs. marginal variance | Reduced rank models | Works cited

Multivariate Generalized Autoregressive Conditional Heteroskedasticity (MGARCH) models | Exploratory MGARCH | Confirmatory MGARCH | Comparison

Nonlinearity

Random slopes models

Approximating diffusive movement among adjacent spatial strata

Introducing ecostate | State-space mass balance modelling | Age- and size-structured dynamics | Theoretical background | Equilibrium calculation | Projecting nonequilibrium dynamics over time | References

Bivariate generalized linear mixed model structure | Spatial domains | Stochastic partial differentiaul equation (SPDE) | Simultaneous autoregressive (SAR): | Stream networks using a tail-down exponential correlation function | Structural equation models | Dynamic structural equation models | Spatial interactions for SEM and DSEM | Generalized additive model | Spatially varying coefficients | Notation summary | Works cited

Comparison with phylolm | Generalized linear models | Poisson-distributed response | Binomial regression | Summary of PGLM results | Compare with phylopath | Comparison with sem | Comparison with Rphylopars

Estimability for multiple covariance transformations | Scaling of runtime with increased tree size

Model comparison: some important differences | Model fitting: sometimes different

Preparing the Then et al. mortality database | Fitting and selecting among phylogenetic structural equation models | Visualizing output | Sensitivity to using taxonomic tree