Package: dsem
Type: Package
Title: Dynamic Structural Equation Models
Version: 3.0.0
Date: 2026-06-10
Authors@R: 
    c(person(given = "James",
             family = "Thorson",
             role = c("aut", "cre"),
             email = "James.Thorson@noaa.gov",
             comment = c(ORCID = "0000-0001-7415-1010")),
      person(given = "Maurice",
             family = "Goodman",
             role = c("ctb"),
             email = "goodman.maurice@gmail.com",
             comment = c(ORCID = "0000-0002-6874-2313")),    
      person(given = "Wouter", 
 	     family = "van der Bijl",
             role = c("ctb"),
             comment = c(ORCID = "0000-0002-7366-1868", "template for d-separation test")),
      person(given = "Giovanni M.", 
	     family = "Marchetti", 
	     email = "giovanni.marchetti@unifi.it", 
             role = c("ctr"),
	     comment = c("creator of ggm, from which functions are copied to avoid dependency on package graph not on CRAN"))
    )
Imports: TMB (>= 1.9.18), Matrix, igraph, utils, RTMB (>= 1.7.0),
        ggraph, ggplot2, grid, methods, stats, checkmate
Depends: R (>= 4.0.0),
Suggests: knitr, AER, phylopath, rmarkdown, reshape, gridExtra, dynlm,
        MARSS, ggpubr, vars, testthat, DHARMa
Enhances: rstan, tmbstan
LinkingTo: TMB (>= 1.9.18), RcppEigen
Description: Applies dynamic structural equation models to time-series
        data with generic and simplified specification for simultaneous
        and lagged effects. Methods are described in Thorson et al.
        (2024) "Dynamic structural equation models synthesize ecosystem
        dynamics constrained by ecological mechanisms."
License: GPL-3
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
VignetteBuilder: knitr
LazyData: true
URL: https://james-thorson-noaa.github.io/dsem/
BugReports: https://github.com/James-Thorson-NOAA/dsem/issues/
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: libfontconfig1-dev libfreetype6-dev libglpk-dev
        libicu-dev libxml2-dev
Repository: https://james-thorson-noaa.r-universe.dev
Date/Publication: 2026-07-10 03:50:14 UTC
RemoteUrl: https://github.com/james-thorson-noaa/dsem
RemoteRef: HEAD
RemoteSha: b7aa1addd3b6211a13c3f87d0c3716a600e5584e
NeedsCompilation: yes
Packaged: 2026-10-11 12:48:02 UTC; root
Author: James Thorson [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-7415-1010>),
  Maurice Goodman [ctb] (ORCID: <https://orcid.org/0000-0002-6874-2313>),
  Wouter van der Bijl [ctb] (ORCID:
    <https://orcid.org/0000-0002-7366-1868>, template for d-separation
    test),
  Giovanni M. Marchetti [ctr] (creator of ggm, from which functions are
    copied to avoid dependency on package graph not on CRAN)
Maintainer: James Thorson <James.Thorson@noaa.gov>